R/make_intersect_plot.R
make_intersect_plot.Rd
Make an intersection degree plot for a set of unique identifiers
make_intersect_plot( IDlist, shortNames, mediumUsed, fracMethod, Yrange = c(0, 100), plotType = "Protein" )
IDlist | A list of vectors. Each list item should be a vector of unique identifiers corresponding to protein or proteoform IDs, e.g. UniProt accession numbers or proteoform record numbers from the Consortium for Top-Down Proteomics proteoform atlas. This function is deprecated in favor of `make_intersection_degree_plot()`. |
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shortNames | Vector of short names |
mediumUsed | Vector of media used |
fracMethod | Vector of frac methods |
Yrange | Percentage range to use for the Y-axis of the plot. Defaults to `c(0,100)`. |
plotType | Type of plot to create, typically "Protein" or "Proteoform".This only affects the Y-axis title and can be any string. |